Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821679.1_cds_XP_016500849.1_14641
CDS Infomation

[gene=LOC107819266] [db_xref=GeneID:107819266] [protein=glutamate decarboxylase 4-like] [protein_id=XP_016500849.1] [location=complement(join(13567..14028,14147..14199,14579..14832,15243..15457,15665..15865,16759..16963,17402..17487))] [gbkey=CDS]
Sequence

ATGGTTCTCTCGAAAACCTCCTCTGAGTCGGACGTTTCGGTACACTCCACTTTTGCCTCT
CGCTATGTTCGAACTTCCCTTCCAAGGTTTGAGATGGCGGAGAATTCGATACCAAAAGAG
GCGGCATTTCAAATAATTAACGACGAGTTGATGCTTGACGGGAATCCAAGGCTGAACTTG
GCTTCATTTGTGACAACATGGATGGAGCCAGAGTGTGATAAGCTTATGATGGACTCCATT
AACAAGAACTATGTTGACATGGATGAATACCCTGTTACCACTGAGCTTCAGAATCGCTGC
GTGAACATGATAGCACGTTTATTCAACGCGCCACTAGAAGAGAAGGAGACAGCAGTTGGA
GTGGGTACAGTTGGTTCATCGGAGGCCATAATGCTAGCGGGGCTTGCATTCAAGAGAAAT
TGGCAAAACAAACGCAAAGCTGAGGGCAAACCTTACAATAAGCCCAACATTGTCACTGGC
GCCAATGTTCAGGTGTGCTGGGAGAAATTTGCCAACTATTTTGAAGTGGAATTGAAAGAA
GTAAAGCTAAGGGAAGGGTACTATGTGATGGACCCAGTCCAGGCTGTGGAGATGGTTGAT
GAGAACACCATTTGTGTTGCTGCAATCTTGGGTTCAACCCTTAATGGAGAATTTGAAGAT
GTCAAGCTCTTGAATGATCTTTTGATTGAAAAGAACAAGCAAACTGGATGGAACACACCA
ATTCATGTGGATGCAGCAAGTGGTGGATTCATTGCACCATTCCTGTACCCAGAGCTGGAG
TGGGACTTTAGGCTTCCCTTAGTGAAGAGCATAAATGTGAGTGGGCACAAATATGGGCTT
GTCTATGCTGGTATTGGTTGGGTTATTTGGAGGACCAAACAAGATTTGCCTGAAGAACTC
ATTTTCCACATCAACTATCTTGGAGCTGATCAGCCCACCTTTACTCTCAATTTCTCCAAA
GGTTCAAGTCAAGTCATTGCTCAATATTATCAGCTAATCCGTTTGGGCTATGAGGGATAC
CGAAATGTAATGGAGAACTGTCGCGAAAATGCCATTGTGCTAAGAGAAGGACTCGAAAAA
ACAGGACGTTTTAACATAGTCTCCAAAGATGAAGGTGTCCCTTTGGTGGCCTTTTCCCTC
AAGGACAATAGCCGTCACAATGAGTTCGAGGTGTCCGAGACGCTCCGTAGGTTCGGGTGG
ATCGTCCCGGCCTACACGATGCCCGCTGACGCCCAACACGTCACGGTGCTTCGTGTGGTG
ATCCGGGAGGACTTCTCGCGAACCCTAGCAGAGCGTCTCGTCCTCGACATTGTCAAGGTC
CTCCACGAGCTGGACACACTTCCAGCTAGGCTGAGCGCCAAATTAGAGGAGGTGAAGCTG
GTCAAGAATGGAAAGAAATCTGAACTTGAAGTTCAAAGGGAAGTTACCAATTATTGGAAG
AAGTTTGTTTTAGCTAGGAAAGCACCTGTTTGCTAG

Peptide Sequence

PEP ID

XP_016500849.1
PEP Infomation

PREDICTED: glutamate decarboxylase 4-like [Nicotiana tabacum]
Sequence

MVLSKTSSESDVSVHSTFASRYVRTSLPRFEMAENSIPKEAAFQIINDELMLDGNPRLNL
ASFVTTWMEPECDKLMMDSINKNYVDMDEYPVTTELQNRCVNMIARLFNAPLEEKETAVG
VGTVGSSEAIMLAGLAFKRNWQNKRKAEGKPYNKPNIVTGANVQVCWEKFANYFEVELKE
VKLREGYYVMDPVQAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLIEKNKQTGWNTP
IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKQDLPEEL
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRENAIVLREGLEK
TGRFNIVSKDEGVPLVAFSLKDNSRHNEFEVSETLRRFGWIVPAYTMPADAQHVTVLRVV
IREDFSRTLAERLVLDIVKVLHELDTLPARLSAKLEEVKLVKNGKKSELEVQREVTNYWK
KFVLARKAPVC

Transcript Sequence

Gene sequence data has not been registered.